diff options
Diffstat (limited to 'backend')
| -rwxr-xr-x | backend/tilo.py | 7 | ||||
| -rw-r--r-- | backend/tolData/README.md | 4 |
2 files changed, 8 insertions, 3 deletions
diff --git a/backend/tilo.py b/backend/tilo.py index bb7af16..196f193 100755 --- a/backend/tilo.py +++ b/backend/tilo.py @@ -36,7 +36,7 @@ ROOT_NAME = "cellular organisms" # Classes for objects sent as responses (matches lib.ts types in client-side code) class TolNode: " Used when responding to 'node' and 'chain' requests " - def __init__(self, otolId, children, parent=None, tips=0, pSupport=False, commonName=None, imgName=None): + def __init__(self, otolId, children, parent=None, tips=0, pSupport=False, commonName=None, imgName=None, iucn=None): self.otolId = otolId # string | null self.children = children # string[] self.parent = parent # string | null @@ -44,6 +44,7 @@ class TolNode: self.pSupport = pSupport # boolean self.commonName = commonName # null | string self.imgName = imgName # null | string | [string,string] | [null, string] | [string, null] + self.iucn = iucn # null | string class SearchSugg: " Represents a search suggestion " def __init__(self, name, canonicalName=None): @@ -133,6 +134,10 @@ def lookupNodes(names, tree, dbCur): query = f"SELECT name, alt_name FROM names WHERE pref_alt = 1 AND name IN ({queryParamStr})" for (name, altName) in dbCur.execute(query, names): nameToNodes[name].commonName = altName + # Get IUCN status + query = f"SELECT name, iucn FROM node_iucn WHERE name IN ({queryParamStr})" + for (name, iucn) in dbCur.execute(query, names): + nameToNodes[name].iucn = iucn # return nameToNodes def lookupSuggs(searchStr, suggLimit, tree, dbCur): diff --git a/backend/tolData/README.md b/backend/tolData/README.md index 1248098..ece07b4 100644 --- a/backend/tolData/README.md +++ b/backend/tolData/README.md @@ -74,8 +74,8 @@ Some of the scripts use third-party packages: files in wikidata/, and 'dump-index files' in enwiki/, as specified in their READMEs. 2. Run genMappingData.py, which adds the `eol_ids` and `wiki_ids` tables, - using the files obtained above, and the `nodes` table. It also uses - 'picked mappings' files, if they exist. + as well as `node_iucn`. It uses the files obtained above, the `nodes` table, + and 'picked mappings' files, if they exist. - pickedEolIds.txt contains lines like `3785967|405349`, specifying an otol ID and an eol ID to map it to. The eol ID can be empty, in which case the otol ID won't be mapped. |