From c547ba59906bdd0ccebe5d4592739227dd0c73eb Mon Sep 17 00:00:00 2001 From: Terry Truong Date: Sat, 28 May 2022 12:15:54 +1000 Subject: Convert from python "...".format() to f"..." --- backend/data/genDbpData.py | 22 +++++++++++----------- 1 file changed, 11 insertions(+), 11 deletions(-) (limited to 'backend/data/genDbpData.py') diff --git a/backend/data/genDbpData.py b/backend/data/genDbpData.py index c8394ea..0655344 100755 --- a/backend/data/genDbpData.py +++ b/backend/data/genDbpData.py @@ -41,7 +41,7 @@ iterNum = 0 for (label,) in dbpCur.execute("SELECT label from labels"): iterNum += 1 if iterNum % 1e5 == 0: - print("Processing line {}".format(iterNum)) + print(f"Processing line {iterNum}") # if label in disambigLabels: continue @@ -66,7 +66,7 @@ for (name, variants) in nameToVariants.items(): for name in nodeToLabel: del nameToVariants[name] nodeToLabel["cellular organisms"] = "organism" # Special case for root node -print("Number of conflicts: {}".format(len(nameToVariants))) +print(f"Number of conflicts: {len(nameToVariants)}") # Try conflict resolution via picked-labels print("Resolving conflicts using picked-labels") with open(pickedLabelsFile) as file: @@ -79,15 +79,15 @@ with open(pickedLabelsFile) as file: else: match = nameVariantRegex.match(pickedLabel) if match == None: - print("WARNING: Picked label {} not found (1)".format(pickedLabel), file=sys.stderr) + print(f"WARNING: Picked label {pickedLabel} not found (1)", file=sys.stderr) else: name = match.group(1) if name not in nameToVariants: - print("WARNING: Picked label {} not found (2)".format(pickedLabel), file=sys.stderr) + print(f"WARNING: Picked label {pickedLabel} not found (2)", file=sys.stderr) else: nodeToLabel[name] = pickedLabel del nameToVariants[name] -print("Number of conflicts: {}".format(len(nameToVariants))) +print(f"Number of conflicts: {len(nameToVariants)}") # Try conflict resolution via category-list # Does a generic-category pass first (avoid stuff like Pan being classified as a horse instead of an ape) print("Resolving conflicts using category-list") @@ -131,7 +131,7 @@ for (name, variants) in nameToVariants.items(): break for name in namesToRemove: del nameToVariants[name] -print("Number of conflicts: {}".format(len(nameToVariants))) +print(f"Number of conflicts: {len(nameToVariants)}") # Try conflict resolution via taxon-type information print("Resolving conflicts using instance-type data") taxonTypes = { # Obtained from the DBpedia ontology @@ -170,7 +170,7 @@ iterNum = 0 for (label, type) in dbpCur.execute("SELECT label, type from labels INNER JOIN types on labels.iri = types.iri"): iterNum += 1 if iterNum % 1e5 == 0: - print("Processing line {}".format(iterNum)) + print(f"Processing line {iterNum}") # if type in taxonTypes: name = label.lower() @@ -184,7 +184,7 @@ for (label, type) in dbpCur.execute("SELECT label, type from labels INNER JOIN t if name in nameToVariants: nodeToLabel[name] = label del nameToVariants[name] -print("Number of conflicts: {}".format(len(nameToVariants))) +print(f"Number of conflicts: {len(nameToVariants)}") # Associate nodes with IRIs print("Getting nodes IRIs") nodeToIri = {} @@ -192,7 +192,7 @@ iterNum = 0 for (name, label) in nodeToLabel.items(): row = dbpCur.execute("SELECT iri FROM labels where label = ? COLLATE NOCASE", (label,)).fetchone() if row == None: - print("ERROR: Couldn't find label {}".format(label), file=sys.stderr) + print(f"ERROR: Couldn't find label {label}", file=sys.stderr) sys.exit(1) else: nodeToIri[name] = row[0] @@ -203,7 +203,7 @@ iterNum = 0 for (name, iri) in nodeToIri.items(): iterNum += 1 if iterNum % 1e4 == 0: - print("At iteration {}".format(iterNum)) + print(f"At iteration {iterNum}") # row = dbpCur.execute("SELECT target FROM redirects where iri = ?", (iri,)).fetchone() if row != None: @@ -216,7 +216,7 @@ iterNum = 0 for (name, iri) in nodeToIri.items(): iterNum += 1 if iterNum % 1e4 == 0: - print("At iteration {}".format(iterNum)) + print(f"At iteration {iterNum}") # query = "SELECT abstract, id FROM abstracts INNER JOIN ids ON abstracts.iri = ids.iri WHERE ids.iri = ?" row = dbpCur.execute(query, (iri,)).fetchone() -- cgit v1.2.3