#!/usr/bin/python3 import re import bz2, sqlite3 import argparse parser = argparse.ArgumentParser(description=""" Adds DBpedia labels/types/abstracts/etc data into a database """, formatter_class=argparse.RawDescriptionHelpFormatter) parser.parse_args() labelsFile = 'labels_lang=en.ttl.bz2' # Had about 16e6 entries idsFile = 'page_lang=en_ids.ttl.bz2' redirectsFile = 'redirects_lang=en_transitive.ttl.bz2' disambigFile = 'disambiguations_lang=en.ttl.bz2' typesFile = 'instance-types_lang=en_specific.ttl.bz2' abstractsFile = 'short-abstracts_lang=en.ttl.bz2' dbFile = 'descData.db' # In testing, this script took a few hours to run, and generated about 10GB print('Creating database') dbCon = sqlite3.connect(dbFile) dbCur = dbCon.cursor() print('Reading/storing label data') dbCur.execute('CREATE TABLE labels (iri TEXT PRIMARY KEY, label TEXT)') dbCur.execute('CREATE INDEX labels_idx ON labels(label)') dbCur.execute('CREATE INDEX labels_idx_nc ON labels(label COLLATE NOCASE)') labelLineRegex = re.compile(r'<([^>]+)> <[^>]+> "((?:[^"]|\\")+)"@en \.\n') lineNum = 0 with bz2.open(labelsFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # match = labelLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') dbCur.execute('INSERT INTO labels VALUES (?, ?)', (match.group(1), match.group(2))) print('Reading/storing wiki page ids') dbCur.execute('CREATE TABLE ids (iri TEXT PRIMARY KEY, id INT)') dbCur.execute('CREATE INDEX ids_idx ON ids(id)') idLineRegex = re.compile(r'<([^>]+)> <[^>]+> "(\d+)".*\n') lineNum = 0 with bz2.open(idsFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # match = idLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') try: dbCur.execute('INSERT INTO ids VALUES (?, ?)', (match.group(1), int(match.group(2)))) except sqlite3.IntegrityError as e: # Accounts for certain lines that have the same IRI print(f'WARNING: Failed to add entry with IRI "{match.group(1)}": {e}') print('Reading/storing redirection data') dbCur.execute('CREATE TABLE redirects (iri TEXT PRIMARY KEY, target TEXT)') redirLineRegex = re.compile(r'<([^>]+)> <[^>]+> <([^>]+)> \.\n') lineNum = 0 with bz2.open(redirectsFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # match = redirLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') dbCur.execute('INSERT INTO redirects VALUES (?, ?)', (match.group(1), match.group(2))) print('Reading/storing diambiguation-page data') dbCur.execute('CREATE TABLE disambiguations (iri TEXT PRIMARY KEY)') disambigLineRegex = redirLineRegex lineNum = 0 with bz2.open(disambigFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # match = disambigLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') dbCur.execute('INSERT OR IGNORE INTO disambiguations VALUES (?)', (match.group(1),)) print('Reading/storing instance-type data') dbCur.execute('CREATE TABLE types (iri TEXT, type TEXT)') dbCur.execute('CREATE INDEX types_iri_idx ON types(iri)') typeLineRegex = redirLineRegex lineNum = 0 with bz2.open(typesFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # match = typeLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') dbCur.execute('INSERT INTO types VALUES (?, ?)', (match.group(1), match.group(2))) print('Reading/storing abstracts') dbCur.execute('CREATE TABLE abstracts (iri TEXT PRIMARY KEY, abstract TEXT)') descLineRegex = labelLineRegex lineNum = 0 with bz2.open(abstractsFile, mode='rt') as file: for line in file: lineNum += 1 if lineNum % 1e5 == 0: print(f'At line {lineNum}') # if line[0] == '#': continue match = descLineRegex.fullmatch(line) if match is None: raise Exception(f'ERROR: Line {lineNum} has unexpected format') dbCur.execute('INSERT INTO abstracts VALUES (?, ?)', (match.group(1), match.group(2).replace(r'\"', '"'))) print('Closing database') dbCon.commit() dbCon.close()