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This directory holds files obtained via the
[Open Tree of Life](https://tree.opentreeoflife.org/about/open-tree-of-life).
# Tree Data Files
- `opentree13.4tree.tgz` <br>
Obtained from <https://tree.opentreeoflife.org/about/synthesis-release/v13.4>.
Contains tree data from the [Open Tree of Life](https://tree.opentreeoflife.org/about/open-tree-of-life).
- `labelled_supertree_ottnames.tre` <br>
Extracted from the .tgz file. Describes the structure of the tree.
- `annotations.json` <br>
Extracted from the .tgz file. Contains additional attributes of tree
nodes. Used for finding out which nodes have 'phylogenetic support'.
# Taxonomy Data Files
- `ott3.3.tgz` <br>
Obtained from <https://tree.opentreeoflife.org/about/taxonomy-version/ott3.3>.
Contains taxonomy data from the Open Tree of Life.
- `otol/taxonomy.tsv` <br>
Extracted from the .tgz file. Holds taxon IDs from sources like NCBI, used to map between datasets.
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